OMAS users API documentation

Following are the classes/routines that are directly available to users within the omas library namespace

OMAS data class

omas.ODC(*args, **kw)	OMAS Data Collection class
omas.ODS([imas_version, consistency_check, ...])	OMAS Data Structure class
omas.ODX([DS])	OMAS data xarray class

Functions

omas.browse_imas([user, pretty, quiet, ...])	Browse available IMAS data (machine/pulse/run) for given user
omas.cocos_transform(cocosin_index, ...)	Returns a dictionary with coefficients for how various quantities should get multiplied in order to go from cocosin_index to cocosout_index
omas.codeparams_xml_load(f)	Decorator function to be used around the omas_load_XXX methods to enable loading of code.parameters from an XML string
omas.codeparams_xml_save(f)	Decorator function to be used around the omas_save_XXX methods to enable saving of code.parameters as an XML string
omas.define_cocos(cocos_ind)	Returns dictionary with COCOS coefficients given a COCOS index
omas.del_omas_s3(filename[, user])	Delete an OMAS object from S3
omas.different_ods(ods1, ods2[, ...])	Checks if two ODSs have any difference and returns the string with the cause of the different
omas.get_actor_io_ids(filename)	Parse IMAS Python actor script and return actor input and output IDSs
omas.identify_cocos(B0, Ip, q, psi[, ...])	Utility function to identify COCOS coordinate system If multiple COCOS are possible, then all are returned.
omas.list_omas_s3([user])	List S3 content
omas.load_omas_ascii(filename[, machine, ...])	Load an ODS from ASCII (follows IMAS ASCII_BACKEND convention)
omas.load_omas_ds(filename[, consistency_check])	Load ODS from xarray dataset
omas.load_omas_dx(filename[, consistency_check])	Load ODX from xarray dataset
omas.load_omas_h5(filename[, ...])	Load ODS or ODC from HDF5
omas.load_omas_hdc(hdc[, consistency_check])	Convert HDC data structure to OMAS
omas.load_omas_imas([user, machine, pulse, ...])	Load OMAS data from IMAS
omas.load_omas_iter_scenario(pulse[, run, ...])	Load ODS from ITER IMAS scenario database
omas.load_omas_json(filename[, ...])	Load ODS or ODC from Json
omas.load_omas_machine(machine, pulse[, ...])
omas.load_omas_mongo(find, collection[, ...])	Load an ODS from MongoDB
omas.load_omas_nc(filename[, ...])	Load ODS or ODC from NetCDF file
omas.load_omas_pkl(filename[, ...])	Load ODS or ODC from Python pickle
omas.load_omas_s3(filename[, user, ...])	Download an OMAS object from S3 and read it as pickle
omas.machine_mapping_function(...)	Decorator used to identify machine mapping functions
omas.machine_mappings(machine, branch[, ...])	Function to load the json mapping files (local or remote) Allows for merging external mapping rules defined by users.
omas.machines([machine, branch])	Function to get machines that have their mappings defined This function takes care of remote transfer the needed files (both .json and .py) if a remote branch is requested
omas.ods_2_odx(ods[, homogeneous])	Map ODS to an ODX
omas.ods_sample([ntimes])	Returns an ODS populated with all of the samples
omas.odx_2_ods(odx[, consistency_check])	Map ODX to ODS
omas.omas_environment(ods[, cocosio, ...])	Provides environment for data input/output to/from OMAS
omas.omas_info([structures, ...])	This function returns an ods with the leaf nodes filled with their property informations
omas.omas_info_node(key[, imas_version])	return information about a given node
omas.omas_testdir([filename_topic])	Return path to temporary folder where OMAS TEST file are saved/loaded
omas.probe_endpoints(r0, z0, a0, l0, cocos)	Transform r,z,a,l arrays commonly used to describe poloidal magnetic probes geometry to actual r,z coordinates of the end-points of the probes.
omas.rcparams_environment(**kw)
omas.save_omas_ascii(ods, filename[, ...])	Save an ODS to ASCII (follows IMAS ASCII_BACKEND convention)
omas.save_omas_ds(ods, filename)	Save an ODS to xarray dataset
omas.save_omas_dx(odx, filename)	Save an ODX to xarray dataset
omas.save_omas_h5(ods, filename)	Save an ODS to HDF5
omas.save_omas_hdc(ods)	Convert OMAS data structure to HDC
omas.save_omas_imas(ods, *args, **kwargs)
omas.save_omas_json(ods, filename[, ...])	Save an ODS to Json
omas.save_omas_mongo(ods, collection[, ...])	Save an ODS to MongoDB
omas.save_omas_nc(ods, filename, **kw)	Save an ODS to NetCDF file
omas.save_omas_pkl(ods, filename, **kw)	Save ODS to Python pickle
omas.save_omas_s3(ods, filename[, user, tmp_dir])	Save an OMAS object to pickle and upload it to S3
omas.search_in_array_structure(ods, conditions)	search for the index in an array structure that matches some conditions
omas.search_ion(ion_ods[, label, Z, A, ...])	utility function used to identify the ion number and element numbers given the ion label and or their Z and/or A
omas.test_machine_mapping_functions(__all__, ...)	Function used to test python mapping functions
omas.through_omas_ascii(ods[, method, ...])	Test save and load OMAS ASCII
omas.through_omas_ds(ods[, method])	Test save and load ODS via xarray file format
omas.through_omas_dx(odx[, method])	Test save and load OMAS data xarray via xarray file format
omas.through_omas_h5(ods[, method])	Test save and load OMAS HDF5
omas.through_omas_hdc(ods[, method])	Test save and load HDC
omas.through_omas_imas(ods[, method])	Test save and load OMAS IMAS
omas.through_omas_json(ods[, method])	Test save and load OMAS Json
omas.through_omas_mongo(ods[, method])	Test save and load OMAS MongoDB
omas.through_omas_nc(ods[, method])	Test save and load NetCDF
omas.through_omas_pkl(ods)	Test save and load Python pickle
omas.through_omas_s3(ods[, method])	Test save and load S3
omas.transform_current(rho[, JtoR, JparB, ...])	Given <Jt/R> returns <J.B>, or vice versa Transformation obeys <J.B> = (1/f)*(<B^2>/<1/R^2>)*(<Jt/R> + dp/dpsi*(1 - f^2*<1/R^2>/<B^2>)) N.B.

Misc

omas.CodeParameters([string])	Class used to interface with IMAS code-parameters XML files
omas.OmasDynamicException	Exception raised when dynamic data fetching fails
omas.__version__	str(object='') -> str str(bytes_or_buffer[, encoding[, errors]]) -> str
omas.imas_versions	Dictionary with list of IMAS version and their sub-folder name in the imas_json_dir
omas.latest_imas_version	str(object='') -> str str(bytes_or_buffer[, encoding[, errors]]) -> str
omas.latexit
omas.machine_expression_types	Built-in mutable sequence.
omas.mdstree(server, treename, pulse)	Class to handle the structure of an MDS+ tree.
omas.mdsvalue(server, treename, pulse, TDI)	Execute MDS+ TDI functions
omas.omas_dir	str(object='') -> str str(bytes_or_buffer[, encoding[, errors]]) -> str
omas.omas_rcparams	dictionary of parameters that control how OMAS operates

Modules

omas.omas_physics	physics-based ODS methods and utilities
omas.omas_plot	plotting ODS methods and utilities
omas.omas_sample	sample ODS methods and utilities
omas.omas_structure	functions for handling IMAS XML data dictionaries